Pseudoseq

Fake genomes, fake sequencing, real insights.

Description

The Pseudoseq package allows you to build arbitrary genomes, and simulate DNA sequencing experiments. DNA sequencing experiments are modelled conceptually as a sampling process.

Install

You can install Pseudoseq from the julia REPL. Press ] to enter pkg mode, and enter the following:

add Pseudoseq

Testing

Pseudoseq is tested against Julia 1.X on Linux, OS X, and Windows.