Pseudoseq

Fake genomes, fake sequencing, real insights.

Latest Release MIT license Stable Latest Pkg Status DOI

Description

The Pseudoseq package allows you to build arbitrary genomes, and simulate DNA sequencing experiments. DNA sequencing experiments are modelled conceptually as a sampling process.

Install

You can install Pseudoseq from the julia REPL. Press ] to enter pkg mode again, and enter the following:

add Pseudoseq

Testing

Pseudoseq is tested against Julia 1.X on Linux, OS X, and Windows.